BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037C03LP1|AL430359
(884 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig895 1707 0.0
>3x_Contig895
Length = 3157
Score = 1707 bits (861), Expect = 0.0
Identities = 882/887 (99%), Gaps = 3/887 (0%)
Strand = Plus / Plus
Query: 1 tcgttcgacactcaattgtccagaatccacactacgaagggncaactgatcccattgtcg 60
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 345 tcgttcgacactcaattgtccagaatccacactacgaagtggcaactgatcccattgtcg 404
Query: 61 cagttggtcgaacagaacaaattgatttttattgatggttctatttccgtggaggaagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 cagttggtcgaacagaacaaattgatttttattgatggttctatttccgtggaggaagcc 464
Query: 121 tttaacacgttggtgaaatacaatttgacgtctttacctgtggaaaactctcctgatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tttaacacgttggtgaaatacaatttgacgtctttacctgtggaaaactctcctgatgat 524
Query: 181 atcgactgtttaacttttgattataacgatttgaactcgtatttgttgttagtgctcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 atcgactgtttaacttttgattataacgatttgaactcgtatttgttgttagtgctcaat 584
Query: 241 aagattaccgttaataacccggaagtaacaagacagtgccaattgggacatccggtaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aagattaccgttaataacccggaagtaacaagacagtgccaattgggacatccggtaccc 644
Query: 301 gtagg--aaatcattaaattgactccgaaaaatccattttataaattgccggaacaagag 358
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gtaggggaaatcattaaattgactccgaaaaatccattttataaattgccggaacaagag 704
Query: 359 aacttatccactgcaatgatgatccttggttcaggtgtccatagagtcgccatcacaaac 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 aacttatccactgcaatgatgatccttggttcaggtgtccatagagtcgccatcacaaac 764
Query: 419 caggaaaatactaagattacaggtatcctttcacaaagaagattgatcaaatatttgtgg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 caggaaaatactaagattacaggtatcctttcacaaagaagattgatcaaatatttgtgg 824
Query: 479 gataacgctagatcattccaaaactttgaacacctgttccaaaaatctttgaaagatttg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 gataacgctagatcattccaaaactttgaacacctgttccaaaaatctttgaaagatttg 884
Query: 539 aaaatcggtgttctagatactcatactaaacctacctcgagacaatcaagagtgatctcc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 aaaatcggtgttctagatactcatactaaacctacctcgagacaatcaagagtgatctcc 944
Query: 599 attcaaggcgatgaattgttgataatggcccttttcaaaatgcatacggaaagaatctcg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 attcaaggcgatgaattgttgataatggcccttttcaaaatgcatacggaaagaatctcg 1004
Query: 659 tccatcgcggtaatagacccgcaa-gtaaccttttgggaaatatttcggtcacagacgtc 717
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1005 tccatcgcggtaatagacccgcaaggtaaccttttgggaaatatttcggtcacagacgtc 1064
Query: 718 aagcacatcacaagaacttcccaatatccgttgttacagaatacctgtttacatttcata 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 aagcacatcacaagaacttcccaatatccgttgttacagaatacctgtttacatttcata 1124
Query: 778 agtgttatcctagataagagaggtattgaaatgggtaaagattcattccctatcttccat 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1125 agtgttatcctagataagagaggtattgaaatgggtaaagattcattccctatcttccat 1184
Query: 838 gtttaccctacatcttctcttgcaagaacaattgccaagttggtcgc 884
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1185 gtttaccctacatcttctcttgcaagaacaattgccaagttggtcgc 1231
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6976
Number of Sequences: 1807
Number of extensions: 6976
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 884
length of database: 10,358,551
effective HSP length: 16
effective length of query: 868
effective length of database: 10,329,639
effective search space: 8966126652
effective search space used: 8966126652
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)